pyCirclize_小百科

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Overview

pyCirclize is a circular visualization python package implemented based on matplotlib. This package is developed for the purpose of easily and beautifully plotting circular figure such as Circos Plot and Chord Diagram in Python. In addition, useful genome and phylogenetic tree visualization methods for the bioinformatics field are also implemented. pyCirclize was inspired by circlize and pyCircos .

pyCirclize example plot gallery

Installation

Python 3.9 or later is required for installation.

Install PyPI package:

pip install pycirclize
Install conda-forge package:
conda install -c conda-forge pycirclize
API Usage
API usage is described in each of the following sections.
Getting Started
Plot API Example
Chord Diagram
Radar Chart
Circos Plot (Genomics)
Comparative Genomics
Phylogenetic Tree
Plot Tips

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